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aed_pathogen_pars
See AED Science Manual
p_name
crypto
ecoli
totalcoli
!-
[string]
pathogen name
coef_grwth_uMAX
0
3
2.4
!-
[real]
Max growth rate at 20C
coef_grwth_Tmin
4
4
4
!-
[real]
Tmin and Tmax, f(T)
coef_grwth_Tmax
35
35
35
!-
[real]
Tmin and Tmax, f(T)
coef_grwth_T1
0.008
0.008
0.008
!-
[real]
coef_grwth_T1 and coef_grwth_T2
coef_grwth_T2
0.1
0.1
0.1
!-
[real]
coef_grwth_T1 and coef_grwth_T2
coef_grwth_Kdoc
0
0.3
0.3
!-
[real]
Half-saturation for growth, coef_grwth_Kdoc
coef_grwth_ic
1.0E-9
1.0E-9
1.0E-9
!-
[real]
coef_grwth_ic
coef_mort_kd20
0.03
0.48
0.34
!-
[real]
Mortality rate (Dark death rate) @ 20C and 0 psu
coef_mort_theta
1.08
1.08
1.11
!-
[real]
Temperature multiplier for mortality: coef_mort_theta
coef_mort_c_SM
0
2.0E-10
2.0E-7
!-
[real]
Salinity effect on mortality
coef_mort_alpha
0
6.1
4.2
!-
[real]
Salinity effect on mortality
coef_mort_beta
0
0.25
0.25
!-
[real]
Salinity effect on mortality
coef_mort_c_PHM
0
50
50
!-
[real]
pH effect on mortality
coef_mort_K_PHM
0
6
6
!-
[real]
pH effect on mortality
coef_mort_delta_M
0
4
4
!-
[real]
pH effect on mortality
coef_mort_fdoc
0
0.5
0.5
!-
[real]
Fraction of mortality back to doc
coef_light_kb_vis
0
0.097
0.097
!-
[real]
Light inactivation
coef_light_kb_uva
0
1.16
1.16
!-
[real]
Light inactivation
coef_light_kb_uvb
0
36.4
36.4
!-
[real]
Light inactivation
coef_light_cSb_vis
0.0067
0.0067
0.0067
!-
[real]
Salinity effect on light inactivation
coef_light_cSb_uva
0.0067
0.0067
0.0067
!-
[real]
Salinity effect on light inactivation
coef_light_cSb_uvb
0.0067
0.0067
0.0067
!-
[real]
Salinity effect on light inactivation
coef_light_kDOb_vis
0.5
0.5
0.5
!-
[real]
DO effect on light
coef_light_kDOb_uva
0.5
0.5
0.5
!-
[real]
DO effect on light
coef_light_kDOb_uvb
0.5
0.5
0.5
!-
[real]
DO effect on light
coef_light_cpHb_vis
10
10
10
!-
[real]
pH effect on light inactivation
coef_light_cpHb_uva
10
10
10
!-
[real]
pH effect on light inactivation
coef_light_cpHb_uvb
10
10
10
!-
[real]
pH effect on light inactivation
coef_light_KpHb_vis
5
5
5
!-
[real]
pH effect on light inactivation
coef_light_KpHb_uva
5
5
5
!-
[real]
pH effect on light inactivation
coef_light_KpHb_uvb
5
5
5
!-
[real]
pH effect on light inactivation
coef_light_delb_vis
3
3
3
!-
[real]
exponent for pH effect on light inactivation
coef_light_delb_uva
3
3
3
!-
[real]
exponent for pH effect on light inactivation
coef_light_delb_uvb
3
3
3
!-
[real]
exponent for pH effect on light inactivation
coef_pred_kp20
0
0.2
0.2
!-
[real]
Loss rate due to predation and temp multiplier
coef_pred_theta_P
1
1.04
1.04
!-
[real]
Loss rate due to predation and temp multiplier
coef_sett_fa
0
0.94
0.81
!-
[real]
Attached fraction in water column
coef_sett_w_path
-2.5E-6
-5.0E-7
-5.0E-7
!-
[real]
Sedimentation velocity (m/d) at 20C (-ve means down) for NON-ATTACHED orgs
coef_resus_epsilonP
0.01
0.01
0.01
!-
[real]
Pathogen resuspension rate
coef_resus_tauP_0
0.01
0.01
0.01
!-
[real]
Critical shear stress for organism resuspension
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